How to stop a running query?
r, rodbc, sql-server
Solution
I've just stumbled upon the `odbc` package. It allows to interrupt a query at any time.
Basic usage goes like this:
library(DBI)
myconnection <- dbConnect(odbc::odbc(),
driver = "SQL Server",
server = "my_server_IP_address",
database = "my_DB_name",
uid = "my_user_id",
pwd = "my_password")
dbGetQuery(myconnection, myquery)
I don't have a deep understanding of what happens behind the scenes, but for what I've seen so far in my personal use this package has other advantages over `RODBC`:
- really faster
- get the column types from the DB instead of guessing them (see here)
- no `stringsAsFactors` and `as.is` arguments necessary
Problem
I use RODBC to send queries to an SQL-Server. Sometimes they take too much time to run, so I need to cancel them. Clicking the red "stop" button in RStudio yields this error message: R is not responding to your request to interrupt processing so to stop the current operation you may need to terminate R entirely. Terminating R will cause your R session to immediately abort. Active computations will be interrupted and unsaved source file changes and workspace objects will be discarded. Do you want to terminate R now? And if I click yes my session is indeed terminated. (note: using Rgui instead of RStudio doesn't make things better) However: when I use another software (named "Query ExPlus") to connect to this same SQL-Server, I have a similar stop button, and clicking it instantly interrupts the query, without any crash. when I connect to a PostgreSQL database using the RPostgres package I can also interrupt the query at any time. These two points lead me to think that there should be a way to solve my problem. What can I do? So far my workaround is: ``` library(RODBC) library(R.utils) withTimeout(mydf <- sqlQuery(myconnection, myquery), timeout=120) ``` Note: I don't have permission to kill queries from the database side.