R: How to get parent attributes and node values at the site time?
r, web-scraping, xml, xpath
Solution
In general its not going to be easy:
idNodes <- getNodeSet(doc, "//div[@id]")
ids <- lapply(idNodes, function(x) xmlAttrs(x)['id'])
values <- lapply(idNodes, xpathApply, path = './div[@class]', xmlValue)
attributes <- lapply(idNodes, xpathApply, path = './div[@class]', xmlAttrs)
do.call(rbind.data.frame, mapply(cbind, ids, values, attributes))
V1 V2 V3
1 1 555-5555 phone
2 1 jhon@123.com email
3 2 123-4567 phone
4 2 maria@gmail.com email
5 3 987-6543 phone
6 3 32 age
7 3 New York city
The above will give you attribute and value pairs assumming they are nested in a `div` with an associated `id`.
UPDATE: if you want to wrap it in an xpathApply type call
utilFun <- function(x){
id <- xmlGetAttr(x, 'id')
values <- sapply(xmlChildren(x, omitNodeTypes = "XMLInternalTextNode"), xmlValue)
attributes <- sapply(xmlChildren(x, omitNodeTypes = "XMLInternalTextNode"), xmlAttrs)
data.frame(id = id, attributes = attributes, values = values, stringsAsFactors = FALSE)
}
res <- xpathApply(doc, '//div[@id]', utilFun)
do.call(rbind, res)
id attributes values
1 1 phone 555-5555
2 1 email jhon@123.com
3 2 phone 123-4567
4 2 email maria@gmail.com
5 3 phone 987-6543
6 3 age 32
7 3 city New York
Problem
I have a html and a R code like these and need to relate each node value to its parent id in a data.frame. There are some different information available for each person. ``` example <- "<div class='person' id='1'> <div class='phone'>555-5555</div> <div class='email'>jhon@123.com</div> </div> <div class='person' id='2'> <div class='phone'>123-4567</div> <div class='email'>maria@gmail.com</div> </div> <div class='person' id='3'> <div class='phone'>987-6543</div> <div class='age'>32</div> <div class='city'>New York</div> </div>" doc = htmlTreeParse(example, useInternalNodes = T) values <- xpathSApply(doc, "//*[@class='person']/div", xmlValue) variables <- xpathSApply(doc, "//*[@class='person']/div", xmlGetAttr, 'class') id <- xpathSApply(doc, "//*[@class='person']", xmlGetAttr, 'id') # The problem: create a data.frame(id,variables,values) ``` With `xpathSApply()`, I can get phone, email, and age values as well as person attributes (id) too. However, those information come isolated and I need to reference them to the right data.frame variable and the right person. In my real data there are a lot of different information, so this process of naming each variable has to be automatic. My goal is to create a data.frame like this relating each id to its proper data. ``` id variables values 1 1 phone 555-5555 2 1 email jhon@123.com 3 2 phone 123-4567 4 2 email maria@gmail.com 5 3 phone 987-6543 6 3 age 32 7 3 city New York ``` I believe I would have to create a function to use inside `xpathSApply` which would get at the same time the person phone and the person id, so they would be related, but I haven't had any success with that so far. Can anyone help me?