How to run R on a server without X11, and avoid broken dependencies

r, x11

Solution

Use the virtual framebuffer X11 server -- we do the same to build packages requiring X11 for R builds in headless chroots. Taking e.g. pars of the Build-Depends from `rggobi`:

xvfb xauth xfonts-base

After installing these you can use the `xvfb-run` command. If you start R via e.g.

xvfb-run R --no-save

you should now be able to use routines and commands requiring X11 as e.g. some of the plotting devices, or the tcl/tk initialization which also insists on having X11.

The same trick is useful for web servers.

Problem

I'm running R 2.9 on a large EC2 Ubuntu instance, loaded with RAM, but without a terminal. When I load a library that has display dependencies, such as the sqldf package, I receive the following error: ``` library(sqldf) ... Loading required package: tcltk Loading Tcl/Tk interface ... Error in fun(...) : couldn't connect to display "localhost:11.0" Error : .onLoad failed in 'loadNamespace' for 'tcltk' Error: package 'tcltk' could not be loaded ``` This seems to be a general problem, and I'm wondering how others have solved it. Installing an X11 server is not a desirable solution.

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