Clip values between a minimum and maximum allowed value in R
clamp, clip, r, vectorization
Solution
`Rcpp` has `clamp` for this:
cppFunction('NumericVector rcpp_clip( NumericVector x, double a, double b){
return clamp( a, x, b ) ;
}')
Here is a quick benchmark showing how it performs against other methods discussed :
pmin_pmax_clip <- function(x, a, b) pmax(a, pmin(x, b) )
ifelse_clip <- function(x, a, b) {
ifelse(x <= a, a, ifelse(x >= b, b, x))
}
operations_clip <- function(x, a, b) {
a + (x-a > 0)*(x-a) - (x-b > 0)*(x-b)
}
x <- rnorm( 10000 )
require(microbenchmark)
microbenchmark(
pmin_pmax_clip( x, -2, 2 ),
rcpp_clip( x, -2, 2 ),
ifelse_clip( x, -2, 2 ),
operations_clip( x, -2, 2 )
)
# Unit: microseconds
# expr min lq median uq max
# 1 ifelse_clip(x, -2, 2) 2809.211 3812.7350 3911.461 4481.0790 43244.543
# 2 operations_clip(x, -2, 2) 228.282 248.2500 266.605 1120.8855 40703.937
# 3 pmin_pmax_clip(x, -2, 2) 260.630 284.0985 308.426 336.9280 1353.721
# 4 rcpp_clip(x, -2, 2) 65.413 70.7120 84.568 92.2875 1097.039
Problem
In Mathematica there is the command `Clip[x, {min, max}]` which gives `x` for `min<=x<=max`, `min` for `x<min` and and `max` for `x>max`, see http://reference.wolfram.com/mathematica/ref/Clip.html (mirror) What would be the fastest way to achieve this in R? Ideally it should be a function that is listable, and should ideally work on either a single value, vector, matrix or dataframe...